| President | Start Period | End Period |
| Dr. T. O. Ogunlesi, FMCP, PNMC, DFMC | October 1979 | December 1983 |
| Dr. E. Ade Elebute, FMCS, PNMC, DFMC | January 1984 | December 1985 |
| Dr. Bayo Banjo, FMCR, PNMC, DFMC | January 1986 | December 1987 |
| Dr. A. Akinkugbe, FMCOG, PNMC, DFMC | January 1988 | December 1989 |
| Dr. M. O. Akindele, FMCPsych, PNMC | January 1990 | December 1991 |
| Dr. A. O. Ajayi, FMCGP, PNMC, DFMC | January 1992 | December 1993 |
| Dr. P. A. Okeowo, FMCORL, PNMC, DFMC | January 1994 | December 1995 |
| Dr. S. Olu Oduntan, FMCPH, PNMC, DFMC | January 1996 | December 1997 |
| Dr. C. E. Famewo, FMCA, PNMC | January 1 1998 | January 7 1998 |
| Dr. M. O. Obiaya, FMCA, PNMC | January 1998 | December 1999 |
| Dr. A. A. Majekodunmi, FMCOph, PNMC | January 2000 | December 2001 |
| Dr. Tolu Odugbemi, FMCPath, PNMC | January 2002 | December 2003 |
| Dr. J. C. Azubuike, FMCPaed., PNMC | January2004 | December 2005 |
| Dr. S. O. Jeboda, FMCDS, PNMC | January2006 | December 2007 |
| Dr. M. O. Taiwo, FMCGDP, PNMC | January2008 | December 2009 |
| Dr. L. I. D. Kufeji, FMCS, PNMC | January2010 | December 2011 |
| Dr. V. C. Wakwe, FMCPath. ,PNMC | January 2012 | December 2013 |
| Dr. R. A. Arogundade, FMCR, PNMC | January 2014 | December 2015 |
| Dr. A. A. Olaitan, FMCDS, PNMC | January 2016 | December 2017 |